From d3a875615e0bf5243e5e484a0e16dfe1e24859b1 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Caroline=20Sandsbr=C3=A5ten?= <caroline.sandsbraten@ntnu.no>
Date: Thu, 2 Oct 2025 15:11:08 +0200
Subject: [PATCH] fix unclear function and use Setup.ipynb to setup cw in all
 labs

---
 jupyter/lab/1_SCA_Lab/SCA_lab.ipynb           | 26 ++++++++++++++-----
 .../1_Constructing_the_Glitch_Loop.ipynb      |  2 +-
 .../2_Glitching_Past_a_Password_Check.ipynb   |  2 +-
 .../3_Glitching_a_Memory_Dump.ipynb           |  2 +-
 .../4_Glitching_a_Bootloader.ipynb            |  4 +--
 jupyter/lab/{1_SCA_Lab => }/Setup.ipynb       |  0
 6 files changed, 24 insertions(+), 12 deletions(-)
 rename jupyter/lab/{1_SCA_Lab => }/Setup.ipynb (100%)

diff --git a/jupyter/lab/1_SCA_Lab/SCA_lab.ipynb b/jupyter/lab/1_SCA_Lab/SCA_lab.ipynb
index 9d989d17..62588a2d 100644
--- a/jupyter/lab/1_SCA_Lab/SCA_lab.ipynb
+++ b/jupyter/lab/1_SCA_Lab/SCA_lab.ipynb
@@ -34,10 +34,21 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "SCOPETYPE = 'OPENADC'\n",
-    "PLATFORM = 'CW308_SAM4S'\n",
     "CRYPTO_TARGET = 'TINYAES128C'\n",
-    "SS_VER = 'SS_VER_1_1'"
+    "SS_VER = 'SS_VER_1_1'\n",
+    "\n",
+    "# SCOPETYPE for CW Husky and CW Light\n",
+    "SCOPETYPE = 'OPENADC'\n",
+    "\n",
+    "# For STM32F Target board in individual package\n",
+    "PLATFORM = 'CW308_STM32F4'\n",
+    "\n",
+    "# For STM32F Target board in CW Light package\n",
+    "# PLATFORM = 'CW308_STM32F3'\n",
+    "\n",
+    "# CW Nano:\n",
+    "# SCOPETYPE = 'CWNANO'\n",
+    "# PLATFORM = 'CWNANO'\n"
    ]
   },
   {
@@ -46,7 +57,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "%run \"./Setup.ipynb\""
+    "%run \"../Setup.ipynb\""
    ]
   },
   {
@@ -56,7 +67,7 @@
    "outputs": [],
    "source": [
     "%%bash -s \"$PLATFORM\" \"$CRYPTO_TARGET\" \"$SS_VER\"\n",
-    "cd ../../firmware/mcu/simpleserial-aes\n",
+    "cd ../../../firmware/mcu/simpleserial-aes\n",
     "make PLATFORM=$1 CRYPTO_TARGET=$2 EXTRA_OPTS=ADD_JITTER SS_VER=$3"
    ]
   },
@@ -66,7 +77,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "cw.program_target(scope, prog, \"../../firmware/mcu/simpleserial-aes/simpleserial-aes-{}.hex\".format(PLATFORM))"
+    "cw.program_target(scope, prog, \"../../../firmware/mcu/simpleserial-aes/simpleserial-aes-{}.hex\".format(PLATFORM))"
    ]
   },
   {
@@ -198,7 +209,8 @@
     "def calculate_trace_offset(ref_trace, orig_offset, target_trace, threshold):\n",
     "    ref_len = len(ref_trace)\n",
     "    for i in range(0, len(target_trace) - ref_len):\n",
-    "        if SAD_SUM < threshold:\n",
+    "        sad_sum = #sum together the difference between the reference trace and target trace at a the offset given by i and ref_len.\n",
+    "        if sad_sum < threshold:\n",
     "            return i - orig_offset"
    ]
   },
diff --git a/jupyter/lab/2_Fault_Lab/1_Constructing_the_Glitch_Loop.ipynb b/jupyter/lab/2_Fault_Lab/1_Constructing_the_Glitch_Loop.ipynb
index e4811b46..79870f46 100644
--- a/jupyter/lab/2_Fault_Lab/1_Constructing_the_Glitch_Loop.ipynb
+++ b/jupyter/lab/2_Fault_Lab/1_Constructing_the_Glitch_Loop.ipynb
@@ -163,7 +163,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "%run \"../../Setup_Scripts/Setup_Generic.ipynb\""
+    "%run \"../Setup.ipynb\""
    ]
   },
   {
diff --git a/jupyter/lab/2_Fault_Lab/2_Glitching_Past_a_Password_Check.ipynb b/jupyter/lab/2_Fault_Lab/2_Glitching_Past_a_Password_Check.ipynb
index 7e78218d..11860411 100644
--- a/jupyter/lab/2_Fault_Lab/2_Glitching_Past_a_Password_Check.ipynb
+++ b/jupyter/lab/2_Fault_Lab/2_Glitching_Past_a_Password_Check.ipynb
@@ -104,7 +104,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "%run \"../../Setup_Scripts/Setup_Generic.ipynb\""
+    "%run \"../Setup.ipynb\""
    ]
   },
   {
diff --git a/jupyter/lab/2_Fault_Lab/3_Glitching_a_Memory_Dump.ipynb b/jupyter/lab/2_Fault_Lab/3_Glitching_a_Memory_Dump.ipynb
index 65ae7fe3..2c74de49 100644
--- a/jupyter/lab/2_Fault_Lab/3_Glitching_a_Memory_Dump.ipynb
+++ b/jupyter/lab/2_Fault_Lab/3_Glitching_a_Memory_Dump.ipynb
@@ -86,7 +86,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "%run \"../../Setup_Scripts/Setup_Generic.ipynb\""
+    "%run \"../Setup.ipynb\""
    ]
   },
   {
diff --git a/jupyter/lab/2_Fault_Lab/4_Glitching_a_Bootloader.ipynb b/jupyter/lab/2_Fault_Lab/4_Glitching_a_Bootloader.ipynb
index 5d86f984..0c18fc49 100644
--- a/jupyter/lab/2_Fault_Lab/4_Glitching_a_Bootloader.ipynb
+++ b/jupyter/lab/2_Fault_Lab/4_Glitching_a_Bootloader.ipynb
@@ -80,7 +80,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "%run \"../../Setup_Scripts/Setup_Generic.ipynb\""
+    "%run \"../Setup.ipynb\""
    ]
   },
   {
@@ -100,7 +100,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "fw_path = \".../../../firmware/mcu/simpleserial-aes-bootloader/simpleserial-bootloader-{}.hex\".format(PLATFORM)\n",
+    "fw_path = \"../../../firmware/mcu/simpleserial-aes-bootloader/simpleserial-bootloader-{}.hex\".format(PLATFORM)\n",
     "cw.program_target(scope, prog, fw_path)\n",
     "target.reset_comms()"
    ]
diff --git a/jupyter/lab/1_SCA_Lab/Setup.ipynb b/jupyter/lab/Setup.ipynb
similarity index 100%
rename from jupyter/lab/1_SCA_Lab/Setup.ipynb
rename to jupyter/lab/Setup.ipynb